xml files Search Results


mzdata (.xml) files  (BioWorks Inc)
90
BioWorks Inc mzdata (.xml) files
Mzdata (.Xml) Files, supplied by BioWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc02749473-99-12-16?v=BioWorks+Inc
Average 90 stars, based on 1 article reviews
mzdata (.xml) files - by Bioz Stars, 2026-08
90/100 stars
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eln xml file format  (CambridgeSoft Corporation)
90
CambridgeSoft Corporation eln xml file format
Eln Xml File Format, supplied by CambridgeSoft Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/10__1515_slash_pac___2021___3013-193-1-8?v=CambridgeSoft+Corporation
Average 90 stars, based on 1 article reviews
eln xml file format - by Bioz Stars, 2026-08
90/100 stars
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sbml file biomd0000000106.xml  (Biomodels LLC)
90
Biomodels LLC sbml file biomd0000000106.xml
Sbml File Biomd0000000106.Xml, supplied by Biomodels LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc04933380__pgen__1006132__s001-12-3-8?v=Biomodels+LLC
Average 90 stars, based on 1 article reviews
sbml file biomd0000000106.xml - by Bioz Stars, 2026-08
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xml neuromorphological file specification  (MBF Bioscience)
90
MBF Bioscience xml neuromorphological file specification
Xml Neuromorphological File Specification, supplied by MBF Bioscience, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc09449460-105-8-6?v=MBF+Bioscience
Average 90 stars, based on 1 article reviews
xml neuromorphological file specification - by Bioz Stars, 2026-08
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xml files  (OpenSim Ltd)
90
OpenSim Ltd xml files
Xml Files, supplied by OpenSim Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc10547676__41598_2023_43148_MOESM1_ESM-18-1-8?v=OpenSim+Ltd
Average 90 stars, based on 1 article reviews
xml files - by Bioz Stars, 2026-08
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model xml files  (Biomodels LLC)
90
Biomodels LLC model xml files
Model Xml Files, supplied by Biomodels LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc02909940-48-5-4?v=Biomodels+LLC
Average 90 stars, based on 1 article reviews
model xml files - by Bioz Stars, 2026-08
90/100 stars
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sbml file biomd0000000037.xml  (Biomodels LLC)
90
Biomodels LLC sbml file biomd0000000037.xml
Sbml File Biomd0000000037.Xml, supplied by Biomodels LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc04933380__pgen__1006132__s001-132-3-8?v=Biomodels+LLC
Average 90 stars, based on 1 article reviews
sbml file biomd0000000037.xml - by Bioz Stars, 2026-08
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cell designer 4.4 xml format files  (Gensor Inc)
90
Gensor Inc cell designer 4.4 xml format files
Cell Designer 4.4 Xml Format Files, supplied by Gensor Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc04702833-60-0-12?v=Gensor+Inc
Average 90 stars, based on 1 article reviews
cell designer 4.4 xml format files - by Bioz Stars, 2026-08
90/100 stars
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xml dag file  (Pegasys Inc)
90
Pegasys Inc xml dag file
Diagram showing the client/server model and layering of the Pegasys architecture. Arrows between the layers indicate a transfer of data. The workflow created by manipulating the GUI in the client is sent as a Pegasys <t>DAG</t> <t>XML</t> file to the server. The application layer then processes the XML file, and sends jobs to the job scheduling layer. The analyses are then executed and the results are stored in the database. The adaptor layer takes results stored in the PegasysResultSet data structure in memory in the application layer and can create output in GFF or GAME XML format. This file is then returned to the GUI where it can be digested by the user or input into a visualization tool.
Xml Dag File, supplied by Pegasys Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc00406494-227-1-1?v=Pegasys+Inc
Average 90 stars, based on 1 article reviews
xml dag file - by Bioz Stars, 2026-08
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xml file ending with _patient  (TomoTherapy)
90
TomoTherapy xml file ending with _patient
Diagram showing the client/server model and layering of the Pegasys architecture. Arrows between the layers indicate a transfer of data. The workflow created by manipulating the GUI in the client is sent as a Pegasys <t>DAG</t> <t>XML</t> file to the server. The application layer then processes the XML file, and sends jobs to the job scheduling layer. The analyses are then executed and the results are stored in the database. The adaptor layer takes results stored in the PegasysResultSet data structure in memory in the application layer and can create output in GFF or GAME XML format. This file is then returned to the GUI where it can be digested by the user or input into a visualization tool.
Xml File Ending With Patient, supplied by TomoTherapy, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/pmc03863140-251-19-11?v=TomoTherapy
Average 90 stars, based on 1 article reviews
xml file ending with _patient - by Bioz Stars, 2026-08
90/100 stars
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xml file  (AccuWeather Inc)
90
AccuWeather Inc xml file
Diagram showing the client/server model and layering of the Pegasys architecture. Arrows between the layers indicate a transfer of data. The workflow created by manipulating the GUI in the client is sent as a Pegasys <t>DAG</t> <t>XML</t> file to the server. The application layer then processes the XML file, and sends jobs to the job scheduling layer. The analyses are then executed and the results are stored in the database. The adaptor layer takes results stored in the PegasysResultSet data structure in memory in the application layer and can create output in GFF or GAME XML format. This file is then returned to the GUI where it can be digested by the user or input into a visualization tool.
Xml File, supplied by AccuWeather Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/us11328590-102-7-10?v=AccuWeather+Inc
Average 90 stars, based on 1 article reviews
xml file - by Bioz Stars, 2026-08
90/100 stars
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xml file  (Twilio Inc)
90
Twilio Inc xml file
Diagram showing the client/server model and layering of the Pegasys architecture. Arrows between the layers indicate a transfer of data. The workflow created by manipulating the GUI in the client is sent as a Pegasys <t>DAG</t> <t>XML</t> file to the server. The application layer then processes the XML file, and sends jobs to the job scheduling layer. The analyses are then executed and the results are stored in the database. The adaptor layer takes results stored in the PegasysResultSet data structure in memory in the application layer and can create output in GFF or GAME XML format. This file is then returned to the GUI where it can be digested by the user or input into a visualization tool.
Xml File, supplied by Twilio Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/xml+files/us09641674-265-6-3?v=Twilio+Inc
Average 90 stars, based on 1 article reviews
xml file - by Bioz Stars, 2026-08
90/100 stars
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Image Search Results


Diagram showing the client/server model and layering of the Pegasys architecture. Arrows between the layers indicate a transfer of data. The workflow created by manipulating the GUI in the client is sent as a Pegasys DAG XML file to the server. The application layer then processes the XML file, and sends jobs to the job scheduling layer. The analyses are then executed and the results are stored in the database. The adaptor layer takes results stored in the PegasysResultSet data structure in memory in the application layer and can create output in GFF or GAME XML format. This file is then returned to the GUI where it can be digested by the user or input into a visualization tool.

Journal: BMC Bioinformatics

Article Title: Pegasys: software for executing and integrating analyses of biological sequences

doi: 10.1186/1471-2105-5-40

Figure Lengend Snippet: Diagram showing the client/server model and layering of the Pegasys architecture. Arrows between the layers indicate a transfer of data. The workflow created by manipulating the GUI in the client is sent as a Pegasys DAG XML file to the server. The application layer then processes the XML file, and sends jobs to the job scheduling layer. The analyses are then executed and the results are stored in the database. The adaptor layer takes results stored in the PegasysResultSet data structure in memory in the application layer and can create output in GFF or GAME XML format. This file is then returned to the GUI where it can be digested by the user or input into a visualization tool.

Article Snippet: The Pegasys XML DAG file that includes the parameters for all programs is available for download at .

Techniques:

Screenshot of the Node Properties dialogue window where users can input parameters for the analysis programs. There are three columns – the name of the parameter, its current value and a check box to indicate if this parameter is enabled. Disabled parameters will be excluded from the DAG XML, and consequently from the actual command that is executed on the server. All default values are set in the ProgramList.xml file that the server reads on startup.

Journal: BMC Bioinformatics

Article Title: Pegasys: software for executing and integrating analyses of biological sequences

doi: 10.1186/1471-2105-5-40

Figure Lengend Snippet: Screenshot of the Node Properties dialogue window where users can input parameters for the analysis programs. There are three columns – the name of the parameter, its current value and a check box to indicate if this parameter is enabled. Disabled parameters will be excluded from the DAG XML, and consequently from the actual command that is executed on the server. All default values are set in the ProgramList.xml file that the server reads on startup.

Article Snippet: The Pegasys XML DAG file that includes the parameters for all programs is available for download at .

Techniques: